C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: copine VI (neuronal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560845 CPNE6-007 ENSG00000100884 9606 + 14:24075831-24076840 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartLiverPlacentaENST00000560845
Transcript ID Adipose Heart Liver Placenta
ENST00000560845 0.276±0.00 0.152±0.00 0.343±0.22 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031H CIL_00031H_0001 CGP 14:24052000-24078100
CIL_0003F9 CIL_0003F9_0001 CGP 14:24070837-24115014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171643 Cpne6-007 protein_coding Mus_musculus 0 435
ENSMUST00000163767 Cpne6-005 protein_coding Mus_musculus 0 435
ENSMUST00000074225 Cpne6-001 protein_coding Mus_musculus 0 435
ENSMUST00000165262 Cpne6-003 protein_coding Mus_musculus 0 435
ENSMUST00000169869 Cpne6-004 retained_intron Mus_musculus 0 270
ENSMUST00000170155 Cpne6-002 retained_intron Mus_musculus 0 270
ENSMUST00000131659 Cpne7-002 retained_intron Mus_musculus 0 195
ENSMUST00000037900 Cpne7-001 protein_coding Mus_musculus 0 195
ENSMUST00000134235 Cpne7-003 retained_intron Mus_musculus 0 195

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