C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000164998  |
Galnt1-003 |
ENSMUSG00000000420 |
10090 | + |
18:24205959-24254630  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002FM | CIL_0002FM_0003 | CGP | 18:24104757-24286818 |
| CIL_00002F | CIL_00002F_0002 | CGP | 18:24205344-24477765 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004653 | IDA | polypeptide N-acetylgalactosaminyltransferase activity |
| GO:0006493 | IDA | protein O-linked glycosylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000269195
|
GALNT1-001 | protein_coding | Homo_sapiens | 0 | 806 |
|
ENST00000589189
|
GALNT1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 872 |
|
ENST00000590654
|
GALNT1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 468 |
|
ENST00000591081
|
GALNT1-002 | protein_coding | Homo_sapiens | 0 | 610 |
|
ENST00000591924
|
GALNT1-006 | protein_coding | Homo_sapiens | 0 | 617 |
