C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 90kDa alpha (cytosolic), class B member 2, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602906 HSP90AB2P-001 ENSG00000205940 9606 + 4:13333414-13338302 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000602906
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000602906 1.729±0.00 1.590±0.00 4.754±0.00 2.376±0.00 6.175±0.00 2.935±0.00 1.658±1.64 0.709±0.00 2.497±0.00 0.032±0.00 0.661±0.50 0.070±0.03 4.197±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XJ CIL_0001XJ_0001 CGP 4:11393150-13484365
CIL_00086Z CIL_00086Z_0001 VISTA 4:12824858-13425752
CIL_00097J CIL_00097J_0001 VISTA 4:13215873-13817543

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024739 Hsp90ab1-001 protein_coding Mus_musculus 0 466
ENSMUST00000119159 Gm13498-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000166469 Hsp90ab1-006 protein_coding Mus_musculus 0 344
ENSMUST00000163966 Hsp90ab1-007 nonsense_mediated_decay Mus_musculus 0 331
ENSDART00000129014 hsp90ab1-201 protein_coding Danio_rerio 0 315
ENSDART00000020084 hsp90ab1-001 protein_coding Danio_rerio 0 315
ENSMUST00000145205 Hsp90ab1-005 retained_intron Mus_musculus 0 285
ENSMUST00000151306 Hsp90ab1-003 retained_intron Mus_musculus 0 213
ENSMUST00000146770 Hsp90ab1-004 retained_intron Mus_musculus 5.99994e-41 172
ENSMUST00000118187 Gm11875-001 processed_pseudogene Mus_musculus 5e-37 159

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