C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal sequence receptor, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166518 Ssr4-201 ENSMUSG00000002014 10090 + X:73787028-73790824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166518
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166518 72.778±3.52 111.164±5.42 63.918±12.66 30.715±8.05 68.284±15.60 111.269±9.44 34.850±4.75 90.390±7.87 92.535±16.71 54.468±22.11 31.338±3.51 74.662±12.92 100.573±11.93 16.393±8.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UU CIL_0001UU_0002 CGP X:73778963-73790830
CIL_0001UT CIL_0001UT_0002 CGP X:73787028-73824969

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320857 SSR4-005 protein_coding Homo_sapiens 0 636
ENST00000370085 SSR4-001 protein_coding Homo_sapiens 0 228
ENST00000370086 SSR4-006 protein_coding Homo_sapiens 0 643
ENST00000370087 SSR4-009 protein_coding Homo_sapiens 0 632
ENST00000460616 SSR4-008 processed_transcript Homo_sapiens 0 399
ENST00000471724 SSR4-011 processed_transcript Homo_sapiens 8.40779e-45 183
ENST00000471880 SSR4-012 processed_transcript Homo_sapiens 0 532
ENST00000482902 SSR4-007 processed_transcript Homo_sapiens 1e-20 106
ENST00000485612 SSR4-003 processed_transcript Homo_sapiens 0 536
ENST00000486204 SSR4-002 processed_transcript Homo_sapiens 0 534
ENST00000491833 SSR4-010 processed_transcript Homo_sapiens 6e-20 102

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