C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, non-receptor type 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166624 Ptpn4-003 ENSMUSG00000026384 10090 - 1:119658044-119687637 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000166624
Transcript ID Liver
ENSMUST00000166624 0.612±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WE CIL_0003WE_0002 CGP 1:119545037-119837613
CIL_0001TM CIL_0001TM_0002 CGP 1:119652467-119913208

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004726 IDA non-membrane spanning protein tyrosine phosphatase activity
GO:0035335 IDA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263708 PTPN4-001 protein_coding Homo_sapiens 0 1995
ENST00000430976 PTPN4-002 nonsense_mediated_decay Homo_sapiens 0 1310
ENST00000441089 PTPN4-008 protein_coding Homo_sapiens 0 782
ENST00000469511 PTPN4-007 retained_intron Homo_sapiens 0 652

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