C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polo-like kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168287 Plk4-002 ENSMUSG00000025758 10090 + 3:40800054-40816883 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryENSMUST00000168287
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary
ENSMUST00000168287 0.393±0.00 0.395±0.07 0.902±0.00 0.899±0.17 0.140±0.00 0.297±0.00 0.247±0.00 0.079±0.00 1.680±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AJ CIL_0007AJ_0002 CGP 3:40744495-40816883
CIL_0007AK CIL_0007AK_0002 CGP 3:40800019-40846885

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005730 IDA nucleolus
GO:0005814 ISS centriole
GO:0006468 IEA protein phosphorylation
GO:0007099 ISS centriole replication
GO:0042802 IPI identical protein binding
GO:0046601 ISO:ISS positive regulation of centriole replication
GO:0060707 IMP trophoblast giant cell differentiation
GO:0098535 IMP de novo centriole assembly
GO:0098536 IDA deuterosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270861 PLK4-001 protein_coding Homo_sapiens 0 1448
ENST00000503914 PLK4-007 retained_intron Homo_sapiens 0 427
ENST00000507249 PLK4-005 protein_coding Homo_sapiens 0 2789
ENST00000507454 PLK4-011 retained_intron Homo_sapiens 0 339
ENST00000508113 PLK4-009 protein_coding Homo_sapiens 0 390
ENST00000510192 PLK4-010 retained_intron Homo_sapiens 0 580
ENST00000510605 PLK4-008 retained_intron Homo_sapiens 0 374
ENST00000511942 PLK4-006 processed_transcript Homo_sapiens 0 496
ENST00000513090 PLK4-003 protein_coding Homo_sapiens 0 950
ENST00000514379 PLK4-002 protein_coding Homo_sapiens 0 1325
ENST00000515069 PLK4-004 protein_coding Homo_sapiens 0 1448

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