C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007AK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142731-ENSG00000164073 CGP 9606 4:127880861-127965995
GeneTranscriptPositionBiotype
ENSG00000142731 (PLK4)
polo-like kinase 4 		ENST00000270861 (PLK4-001) 127880861-127899195 protein_coding
ENST00000503914 (PLK4-007) 127880899-127883470 retained_intron
ENST00000507249 (PLK4-005) 127880929-127898800 protein_coding
ENST00000507454 (PLK4-011) 127890997-127892693 retained_intron
ENST00000508113 (PLK4-009) 127891171-127898486 protein_coding
ENST00000510192 (PLK4-010) 127893200-127898542 retained_intron
ENST00000510605 (PLK4-008) 127887334-127891194 retained_intron
ENST00000511942 (PLK4-006) 127880893-127883516 processed_transcript
ENST00000513090 (PLK4-003) 127880927-127898639 protein_coding
ENST00000514379 (PLK4-002) 127881232-127898579 protein_coding
ENST00000515069 (PLK4-004) 127880909-127899067 protein_coding
ENSG00000164073 (MFSD8)
major facilitator superfamily domain containing 8 		ENST00000296468 (MFSD8-001) 127917805-127965949 protein_coding
ENST00000503928 (MFSD8-008) 127918152-127920599 processed_transcript
ENST00000504126 (MFSD8-007) 127921357-127921989 retained_intron
ENST00000505284 (MFSD8-005) 127921731-127965142 processed_transcript
ENST00000508441 (MFSD8-006) 127938783-127965145 processed_transcript
ENST00000509826 (MFSD8-004) 127921862-127965938 nonsense_mediated_decay
ENST00000513559 (MFSD8-003) 127920342-127965963 protein_coding
ENST00000515130 (MFSD8-002) 127919206-127965995 processed_transcript
ENSG00000164074 (C4orf29)
chromosome 4 open reading frame 29 		ENST00000388795 (C4orf29-002) 127965411-128039711 protein_coding
ENST00000398965 (C4orf29-201) 127965306-128031290 protein_coding
ENST00000444616 (C4orf29-001) 127965377-128031313 protein_coding
ENST00000473040 (C4orf29-004) 127965315-128036286 nonsense_mediated_decay
ENST00000513371 (C4orf29-005) 127965474-128008957 protein_coding
ENST00000611882 (C4orf29-202) 127965506-128030805 protein_coding
ENSG00000251821 (RNU6-583P)
RNA, U6 small nuclear 583, pseudogene 		ENST00000516012 (RNU6-583P-201) 127891991-127892082 snRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0007AK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025758-ENSMUSG00000025759 CGP 10090 3:40800019-40846885
GeneTranscriptPositionBiotype
ENSMUSG00000025758 (Plk4)
polo-like kinase 4 		ENSMUST00000026858 (Plk4-001) 40800019-40816883 protein_coding
ENSMUST00000166936 (Plk4-008) 40801463-40802044 retained_intron
ENSMUST00000167556 (Plk4-005) 40800254-40816417 protein_coding
ENSMUST00000168287 (Plk4-002) 40800054-40816883 protein_coding
ENSMUST00000168363 (Plk4-003) 40800028-40808413 retained_intron
ENSMUST00000169566 (Plk4-006) 40800781-40805013 protein_coding
ENSMUST00000170825 (Plk4-004) 40800050-40806065 protein_coding
ENSMUST00000171538 (Plk4-007) 40812738-40816882 nonsense_mediated_decay
ENSMUSG00000025759 (Mfsd8)
major facilitator superfamily domain containing 8 		ENSMUST00000026859 (Mfsd8-001) 40818070-40846885 protein_coding
ENSMUST00000137533 (Mfsd8-002) 40826933-40846694 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AK_0001ENSG00000142731ENST00000270861ENST00000503914ENST00000507249ENST00000507454ENST00000508113ENST00000510192ENST00000510605ENST00000511942ENST00000513090ENST00000514379ENST00000515069ENSG00000164073ENST00000296468ENST00000503928ENST00000504126ENST00000505284ENST00000508441ENST00000509826ENST00000513559ENST00000515130ENSG00000164074ENST00000388795ENST00000398965ENST00000444616ENST00000473040ENST00000513371ENST00000611882ENSG00000251821ENST00000516012CIL_0007AK_0002ENSMUSG00000025758ENSMUST00000026858ENSMUST00000166936ENSMUST00000167556ENSMUST00000168287ENSMUST00000168363ENSMUST00000169566ENSMUST00000170825ENSMUST00000171538ENSMUSG00000025759ENSMUST00000026859ENSMUST00000137533
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AK_0001ENSG00000142731ENST00000270861ENST00000503914ENST00000507249ENST00000507454ENST00000508113ENST00000510192ENST00000510605ENST00000511942ENST00000513090ENST00000514379ENST00000515069ENSG00000164073ENST00000296468ENST00000503928ENST00000505284ENST00000513559ENSG00000164074ENST00000388795ENST00000398965ENST00000473040ENST00000611882ENSG00000251821ENST00000516012CIL_0007AK_0002ENSMUSG00000025758ENSMUST00000026858ENSMUST00000167556ENSMUST00000168287ENSMUST00000168363ENSMUST00000170825ENSMUST00000171538ENSMUSG00000025759ENSMUST00000026859ENSMUST00000137533
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142731 ENST00000270861 N/A N/A N/A N/A N/A 0.337±0.00 0.023±0.00 N/A N/A N/A N/A 0.139±0.00 0.371±0.03 N/A
ENST00000503914 N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000507249 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 0.139±0.00 0.251±0.00 N/A
ENST00000507454 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.837±0.00 N/A N/A N/A N/A
ENST00000508113 N/A N/A N/A N/A N/A 0.241±0.00 N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A
ENST00000510192 0.217±0.00 N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A
ENST00000510605 N/A N/A N/A N/A N/A 1.718±0.00 0.121±0.00 0.375±0.00 0.083±0.00 N/A N/A 5.175±0.00 2.557±0.00 15.399±0.00
ENST00000511942 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.673±0.00 N/A N/A N/A N/A
ENST00000513090 0.176±0.00 N/A N/A N/A 0.026±0.00 0.165±0.00 N/A N/A N/A 0.057±0.00 N/A 1.044±0.35 0.302±0.00 6.886±2.15
ENST00000514379 N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.137±0.00 N/A N/A 0.021±0.00 0.373±0.31 N/A 1.900±0.00
ENST00000515069 0.080±0.00 0.437±0.00 N/A 0.506±0.00 0.251±0.03 N/A 0.082±0.00 0.046±0.00 0.199±0.18 0.016±0.00 N/A 1.094±0.78 1.173±0.00 2.441±0.20
ENSG00000164073 ENST00000296468 N/A 1.563±0.00 N/A 1.616±0.00 1.336±0.48 0.650±0.00 0.720±0.00 2.325±0.00 1.499±0.00 2.185±0.00 N/A 1.278±0.29 0.536±0.00 1.504±0.00
ENST00000503928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.414±0.00
ENST00000504126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.141±0.00 N/A
ENST00000508441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513559 N/A N/A 1.181±0.00 2.717±0.00 2.269±0.00 3.266±0.00 N/A N/A 1.791±0.01 4.026±0.00 N/A 2.299±0.00 1.573±0.20 N/A
ENST00000515130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164074 ENST00000388795 N/A N/A N/A 0.461±0.00 1.009±0.00 N/A 1.521±0.66 1.505±0.00 N/A N/A 0.631±0.34 N/A N/A N/A
ENST00000398965 N/A N/A N/A N/A N/A 2.120±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473040 N/A N/A 0.868±0.00 N/A 1.713±0.00 N/A N/A 3.239±0.00 1.203±0.00 2.987±0.00 N/A 1.714±0.42 N/A N/A
ENST00000513371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611882 N/A 2.457±0.00 1.090±0.00 N/A N/A 3.197±0.00 N/A N/A 2.856±0.00 N/A 1.861±0.00 N/A N/A N/A
ENSG00000251821 ENST00000516012 N/A N/A N/A 0.715±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025758 ENSMUST00000026858 0.365±0.07 0.462±0.16 1.329±0.28 5.136±0.79 N/A 0.644±0.24 N/A 0.328±0.00 7.332±6.91 0.525±0.05 0.047±0.00 2.041±0.95 7.723±4.29 10.484±5.18
ENSMUST00000166936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167556 N/A N/A N/A 0.603±0.00 N/A N/A N/A N/A 2.970±2.83 N/A 0.105±0.06 1.249±0.19 7.886±0.11 7.804±4.67
ENSMUST00000168287 0.393±0.00 0.395±0.07 N/A N/A 0.902±0.00 0.899±0.17 0.140±0.00 0.297±0.00 N/A 0.247±0.00 0.079±0.00 1.680±0.84 N/A N/A
ENSMUST00000168363 N/A 0.267±0.00 N/A 0.663±0.34 0.499±0.39 0.384±0.07 0.045±0.00 0.199±0.06 0.091±0.06 0.395±0.20 0.053±0.03 0.410±0.00 N/A N/A
ENSMUST00000169566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170825 N/A 0.753±0.29 N/A 0.424±0.00 N/A 0.971±0.00 N/A 0.316±0.00 0.250±0.12 N/A 0.074±0.03 N/A 2.477±1.26 7.751±0.00
ENSMUST00000171538 2.078±0.00 0.528±0.07 N/A N/A 1.291±0.00 N/A 0.362±0.10 N/A 0.263±0.14 N/A 0.437±0.00 1.729±0.00 N/A N/A
ENSMUSG00000025759 ENSMUST00000026859 6.031±2.44 2.238±0.26 2.625±0.31 3.127±1.42 4.104±1.64 0.923±0.43 2.043±0.31 1.393±0.38 1.798±0.41 1.919±0.62 3.279±0.69 1.659±0.92 1.454±0.89 0.679±0.30
ENSMUST00000137533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.03 1.759±0.00 N/A

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