C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polo-like kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515069 PLK4-004 ENSG00000142731 9606 + 4:127880909-127899067 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000515069
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000515069 0.080±0.00 0.437±0.00 0.506±0.00 0.251±0.03 0.082±0.00 0.046±0.00 0.199±0.18 0.016±0.00 1.094±0.78 1.173±0.00 2.441±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AJ CIL_0007AJ_0001 CGP 4:127781821-127899195
CIL_0007AK CIL_0007AK_0001 CGP 4:127880861-127965995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170825 Plk4-004 protein_coding Mus_musculus 0 1502
ENSMUST00000168363 Plk4-003 retained_intron Mus_musculus 0 1456
ENSMUST00000026858 Plk4-001 protein_coding Mus_musculus 0 1456
ENSMUST00000168287 Plk4-002 protein_coding Mus_musculus 0 1448
ENSMUST00000167556 Plk4-005 protein_coding Mus_musculus 0 1360
ENSMUST00000169566 Plk4-006 protein_coding Mus_musculus 0 438
ENSMUST00000171538 Plk4-007 nonsense_mediated_decay Mus_musculus 0 420
ENSMUST00000166936 Plk4-008 retained_intron Mus_musculus 0 255

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