| Transcript ID | Muscle |
|---|---|
| ENSMUST00000169237 | 1.022±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Rab geranylgeranyl transferase, a subunit | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000169237  |
Rabggta-203 |
ENSMUSG00000040472 |
10090 | - |
14:55715877-55722176  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001SH | CIL_0001SH_0002 | CGP | 14:55700009-55722257 |
| CIL_0002LB | CIL_0002LB_0002 | CGP | 14:55715873-55745690 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004663 | IMP | Rab geranylgeranyltransferase activity |
| GO:0005968 | ISS | Rab-protein geranylgeranyltransferase complex |
| GO:0008270 | IEA | zinc ion binding |
| GO:0017137 | ISS | Rab GTPase binding |
| GO:0018344 | IMP | protein geranylgeranylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000216840
|
RABGGTA-002 | protein_coding | Homo_sapiens | 0 | 1960 |
|
ENST00000399409
|
RABGGTA-003 | protein_coding | Homo_sapiens | 0 | 1980 |
|
ENST00000543002
|
RABGGTA-006 | retained_intron | Homo_sapiens | 0 | 1044 |
|
ENST00000558376
|
RABGGTA-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 1929 |
|
ENST00000558534
|
RABGGTA-016 | processed_transcript | Homo_sapiens | 0 | 542 |
|
ENST00000558649
|
RABGGTA-013 | retained_intron | Homo_sapiens | 0 | 484 |
|
ENST00000558936
|
RABGGTA-018 | retained_intron | Homo_sapiens | 0 | 593 |
|
ENST00000558954
|
RABGGTA-020 | processed_transcript | Homo_sapiens | 0 | 549 |
|
ENST00000559551
|
RABGGTA-007 | retained_intron | Homo_sapiens | 0 | 1905 |
|
ENST00000559586
|
RABGGTA-017 | processed_transcript | Homo_sapiens | 0 | 737 |
|
ENST00000559850
|
RABGGTA-014 | retained_intron | Homo_sapiens | 0 | 335 |
|
ENST00000559974
|
RABGGTA-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 1951 |
|
ENST00000560127
|
RABGGTA-019 | nonsense_mediated_decay | Homo_sapiens | 0 | 457 |
|
ENST00000560163
|
RABGGTA-021 | processed_transcript | Homo_sapiens | 0 | 505 |
|
ENST00000560207
|
RABGGTA-022 | retained_intron | Homo_sapiens | 0 | 283 |
|
ENST00000560243
|
RABGGTA-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 619 |
|
ENST00000560521
|
RABGGTA-009 | protein_coding | Homo_sapiens | 0 | 658 |
|
ENST00000560777
|
RABGGTA-012 | protein_coding | Homo_sapiens | 0 | 725 |
|
ENST00000560871
|
RABGGTA-015 | processed_transcript | Homo_sapiens | 0 | 586 |
|
ENST00000560998
|
RABGGTA-005 | retained_intron | Homo_sapiens | 0 | 1214 |
|
ENST00000561055
|
RABGGTA-011 | retained_intron | Homo_sapiens | 0 | 283 |
