C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2D 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170693 Ube2d2a-202 ENSMUSG00000091896 10090 + 18:35771559-35807172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170693 10.067±1.68 17.344±8.74 15.692±5.42 21.455±6.16 10.221±3.19 9.750±2.58 9.278±0.41 9.243±1.81 9.373±5.32 12.672±2.22 16.202±1.85 13.352±10.92 31.667±11.14 19.641±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000548 CIL_000548_0002 CGP 18:35733678-35807172
CIL_000549 CIL_000549_0002 CGP 18:35771559-35861687

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0016881 IEA acid-amino acid ligase activity
GO:0043234 ISO protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000049285 ube2d2l-001 protein_coding Danio_rerio 0 444
ENSDART00000063837 ube2d2-201 protein_coding Danio_rerio 0 374
ENST00000253815 UBE2D2-201 protein_coding Homo_sapiens 0 712
ENST00000321805 UBE2D3-013 protein_coding Homo_sapiens 0 470
ENST00000338145 UBE2D3-006 protein_coding Homo_sapiens 0 470
ENST00000343106 UBE2D3-002 protein_coding Homo_sapiens 0 414
ENST00000349311 UBE2D3-012 protein_coding Homo_sapiens 0 470
ENST00000350435 UBE2D3-014 protein_coding Homo_sapiens 0 466
ENST00000357194 UBE2D3-003 protein_coding Homo_sapiens 0 466
ENST00000394801 UBE2D3-004 protein_coding Homo_sapiens 0 470
ENST00000394803 UBE2D3-005 protein_coding Homo_sapiens 0 470
ENST00000394804 UBE2D3-201 protein_coding Homo_sapiens 0 470
ENST00000398733 UBE2D2-001 protein_coding Homo_sapiens 0 2754
ENST00000398734 UBE2D2-004 nonsense_mediated_decay Homo_sapiens 0 1275
ENST00000424409 UBE2D3P2-001 processed_pseudogene Homo_sapiens 0 363
ENST00000436669 UBE2D3P1-001 processed_pseudogene Homo_sapiens 0 435
ENST00000453744 UBE2D3-001 protein_coding Homo_sapiens 0 470
ENST00000502404 UBE2D3-017 protein_coding Homo_sapiens 0 466
ENST00000502563 UBE2D3-027 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000502690 UBE2D3-011 protein_coding Homo_sapiens 0 237
ENST00000503742 UBE2D3-007 retained_intron Homo_sapiens 0 300
ENST00000504211 UBE2D3-019 protein_coding Homo_sapiens 0 466
ENST00000505007 UBE2D2-003 protein_coding Homo_sapiens 0 599
ENST00000505009 UBE2D3-031 retained_intron Homo_sapiens 0 385
ENST00000505207 UBE2D3-015 protein_coding Homo_sapiens 0 466
ENST00000505307 UBE2D3-022 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000505548 UBE2D2-002 protein_coding Homo_sapiens 0 1225
ENST00000507845 UBE2D3-016 protein_coding Homo_sapiens 0 466
ENST00000508238 UBE2D3-009 protein_coding Homo_sapiens 0 305
ENST00000508474 UBE2D3-008 retained_intron Homo_sapiens 0 466
ENST00000508476 UBE2D3-018 protein_coding Homo_sapiens 0 311
ENST00000508635 UBE2D3-024 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000508974 UBE2D3-026 nonsense_mediated_decay Homo_sapiens 5.99756e-43 178
ENST00000510129 UBE2D3-028 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000510470 UBE2D2-007 retained_intron Homo_sapiens 0 270
ENST00000511691 UBE2D2-008 retained_intron Homo_sapiens 0 599
ENST00000511725 UBE2D2-006 protein_coding Homo_sapiens 0 800
ENST00000514755 UBE2D3-020 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000618836 UBE2D3-202 protein_coding Homo_sapiens 0 468

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