C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TraB domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170754 Trabd-005 ENSMUSG00000015363 10090 + 15:89082529-89087071 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLungOvaryENSMUST00000170754
Transcript ID Adipose Brain Breast Colon Lung Ovary
ENSMUST00000170754 1.468±0.21 1.019±0.06 2.181±0.31 2.868±0.00 1.708±0.04 2.137±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GZ CIL_0000GZ_0002 CGP 15:89059734-89087077
CIL_000098 CIL_000098_0002 CGP 15:89075124-89100340

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303434 TRABD-001 protein_coding Homo_sapiens 0 353
ENST00000380909 TRABD-003 protein_coding Homo_sapiens 0 353
ENST00000395827 TRABD-004 protein_coding Homo_sapiens 0 353
ENST00000395829 TRABD-005 protein_coding Homo_sapiens 0 353
ENST00000463233 TRABD-002 retained_intron Homo_sapiens 0 202
ENST00000472677 TRABD-006 retained_intron Homo_sapiens 0 204

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