C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polo-like kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170825 Plk4-004 ENSMUSG00000025758 10090 + 3:40800050-40806065 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLiverMusclePlacentaTestisENSMUST00000170825
Transcript ID Adrenal Brain Colon Kidney Liver Muscle Placenta Testis
ENSMUST00000170825 0.753±0.29 0.424±0.00 0.971±0.00 0.316±0.00 0.250±0.12 0.074±0.03 2.477±1.26 7.751±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AJ CIL_0007AJ_0002 CGP 3:40744495-40816883
CIL_0007AK CIL_0007AK_0002 CGP 3:40800019-40846885

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005730 IDA nucleolus
GO:0005814 ISS centriole
GO:0006468 IEA protein phosphorylation
GO:0007099 ISS centriole replication
GO:0042802 IPI identical protein binding
GO:0046601 ISS positive regulation of centriole replication
GO:0060707 IMP trophoblast giant cell differentiation
GO:0098535 IMP de novo centriole assembly
GO:0098536 IDA deuterosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270861 PLK4-001 protein_coding Homo_sapiens 0 1502
ENST00000503914 PLK4-007 retained_intron Homo_sapiens 0 431
ENST00000507249 PLK4-005 protein_coding Homo_sapiens 0 1448
ENST00000511942 PLK4-006 processed_transcript Homo_sapiens 0 499
ENST00000513090 PLK4-003 protein_coding Homo_sapiens 0 278
ENST00000514379 PLK4-002 protein_coding Homo_sapiens 0 1375
ENST00000515069 PLK4-004 protein_coding Homo_sapiens 0 1502

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