C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172464 Ctdspl-003 ENSMUSG00000047409 10090 + 9:118926862-119040649 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0002 VISTA 9:118558597-119161666
CIL_00099X CIL_00099X_0002 VISTA 9:118563323-119168147
CIL_0005VQ CIL_0005VQ_0002 CGP 9:118606690-119043998
CIL_0005AN CIL_0005AN_0002 CGP 9:118926453-119071525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001933 IDA negative regulation of protein phosphorylation
GO:0003674 ND molecular_function
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:2000134 IDA negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273179 CTDSPL-001 protein_coding Homo_sapiens 0 765
ENST00000310189 CTDSPL-005 processed_transcript Homo_sapiens 0 767
ENST00000416688 CTDSPL-007 protein_coding Homo_sapiens 0 202
ENST00000435525 CTDSPL-003 nonsense_mediated_decay Homo_sapiens 1e-22 110
ENST00000436654 CTDSPL-009 protein_coding Homo_sapiens 0 307
ENST00000443503 CTDSPL-002 protein_coding Homo_sapiens 0 1070
ENST00000447745 CTDSPL-008 protein_coding Homo_sapiens 0 658
ENST00000486978 CTDSPL-004 processed_transcript Homo_sapiens 0 464

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