C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436654 CTDSPL-009 ENSG00000144677 9606 + 3:37975773-37982384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000436654
Transcript ID Kidney
ENST00000436654 2.197±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VQ CIL_0005VQ_0001 CGP 3:37452115-37984469
CIL_0008CZ CIL_0008CZ_0001 VISTA 3:37464508-38067589
CIL_00099X CIL_00099X_0001 VISTA 3:37469210-38073013
CIL_0005AN CIL_0005AN_0001 CGP 3:37861960-38007188

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174132 Ctdspl-002 retained_intron Mus_musculus 0 307
ENSMUST00000172464 Ctdspl-003 protein_coding Mus_musculus 0 307
ENSMUST00000073109 Ctdspl-001 protein_coding Mus_musculus 0 307

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