C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast activation protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172676 Fap-002 ENSMUSG00000000392 10090 - 2:62527349-62563717 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverLungENSMUST00000172676
Transcript ID Adrenal Colon Kidney Liver Lung
ENSMUST00000172676 0.113±0.02 0.127±0.04 0.050±0.02 0.030±0.00 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S0 CIL_0003S0_0003 CGP 2:62474530-62574075
CIL_0005KX CIL_0005KX_0002 CGP 2:62500943-62646255

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000188790 FAP-001 protein_coding Homo_sapiens 0 1714
ENST00000422436 FAP-004 nonsense_mediated_decay Homo_sapiens 3e-20 104
ENST00000443424 FAP-015 protein_coding Homo_sapiens 0 1391
ENST00000447386 FAP-007 protein_coding Homo_sapiens 0 547
ENST00000465088 FAP-011 retained_intron Homo_sapiens 0 558
ENST00000465424 FAP-008 retained_intron Homo_sapiens 2e-29 134
ENST00000480838 FAP-003 retained_intron Homo_sapiens 0 1083

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