C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173221 Setd1b-005 ENSMUSG00000038384 10090 + 5:123162709-123165162 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000173221
Transcript ID Breast
ENSMUST00000173221 0.389±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006S CIL_00006S_0003 CGP 5:123103044-123167435
CIL_0002ZI CIL_0002ZI_0002 CGP 5:123142193-123182725

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267197 SETD1B-201 protein_coding Homo_sapiens 0 335
ENST00000329433 HNRNPH1-009 protein_coding Homo_sapiens 0 200
ENST00000356731 HNRNPH1-001 protein_coding Homo_sapiens 0 200
ENST00000393432 HNRNPH1-006 protein_coding Homo_sapiens 0 200
ENST00000442819 HNRNPH1-005 protein_coding Homo_sapiens 0 200
ENST00000502904 HNRNPH1-011 retained_intron Homo_sapiens 0 200
ENST00000510411 HNRNPH1-008 protein_coding Homo_sapiens 0 200
ENST00000510678 HNRNPH1-007 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000514332 HNRNPH1-003 retained_intron Homo_sapiens 0 200
ENST00000515481 HNRNPH1-010 retained_intron Homo_sapiens 0 200
ENST00000542440 SETD1B-001 protein_coding Homo_sapiens 0 335
ENST00000604567 SETD1B-002 protein_coding Homo_sapiens 0 335
ENST00000619791 SETD1B-202 protein_coding Homo_sapiens 0 335

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