C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: empty spiracles homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173919 Emx1-002 ENSMUSG00000033726 10090 + 6:85193519-85204462 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000173919
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000173919 0.059±0.00 0.067±0.03 0.016±0.00 4.240±2.88 0.044±0.01 0.129±0.10 0.011±0.00 0.071±0.00 0.086±0.02 0.057±0.05 0.054±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087O CIL_00087O_0002 VISTA 6:84864955-85466474
CIL_0008RW CIL_0008RW_0002 VISTA 6:84918005-85518946
CIL_0003EH CIL_0003EH_0002 CGP 6:85133678-85204462
CIL_0002DU CIL_0002DU_0003 CGP 6:85187438-85333422

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258106 EMX1-001 protein_coding Homo_sapiens 0 837
ENST00000394111 EMX1-002 protein_coding Homo_sapiens 0 819
ENST00000464675 EMX1-005 retained_intron Homo_sapiens 0 785
ENST00000473732 EMX1-003 protein_coding Homo_sapiens 0 281
ENST00000491023 EMX1-004 processed_transcript Homo_sapiens 0 843
ENST00000546446 EMX2-003 processed_transcript Homo_sapiens 0 215
ENST00000553456 EMX2-001 protein_coding Homo_sapiens 0 215
ENST00000616281 EMX1-006 retained_intron Homo_sapiens 0 566

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