C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: empty spiracles homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546446 EMX2-003 ENSG00000170370 9606 + 10:117544866-117548799 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastENST00000546446
Transcript ID Adrenal Brain Breast
ENST00000546446 1.331±0.00 18.218±0.00 0.146±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H6 CIL_0008H6_0001 VISTA 10:116948553-117549645
CIL_0007KI CIL_0007KI_0001 UCNEbase 10:116961332-118177484
CIL_0008MK CIL_0008MK_0001 VISTA 10:117202873-117804737
CIL_0008G5 CIL_0008G5_0001 VISTA 10:117249689-117851033
CIL_0007ZG CIL_0007ZG_0001 VISTA 10:117250972-117851947
CIL_0008EZ CIL_0008EZ_0001 VISTA 10:117254198-117855349
CIL_0007XD CIL_0007XD_0001 VISTA 10:117432425-118033626
CIL_0008ND CIL_0008ND_0001 VISTA 10:117530148-118131665
CIL_0004H1 CIL_0004H1_0002 CGP 10:117542444-118046603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062216 Emx2-001 protein_coding Mus_musculus 0 710
ENSMUST00000174353 Emx2-002 protein_coding Mus_musculus 0 473
ENSMUST00000174573 Emx2-003 processed_transcript Mus_musculus 0 351
ENSMUST00000173919 Emx1-002 retained_intron Mus_musculus 0 215
ENSMUST00000045942 Emx1-001 protein_coding Mus_musculus 0 215

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