C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast activation protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174234 Fap-006 ENSMUSG00000000392 10090 - 2:62501184-62573851 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverOvaryPlacentaENSMUST00000174234
Transcript ID Adrenal Colon Kidney Liver Ovary Placenta
ENSMUST00000174234 0.063±0.00 0.165±0.00 0.060±0.00 0.035±0.00 0.067±0.00 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S0 CIL_0003S0_0003 CGP 2:62474530-62574075
CIL_0005KX CIL_0005KX_0002 CGP 2:62500943-62646255

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0006508 IEA proteolysis
GO:0008233 IDA peptidase activity
GO:0016020 IEA membrane
GO:0045177 IDA apical part of cell
GO:0045178 IDA basal part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000188790 FAP-001 protein_coding Homo_sapiens 0 2488
ENST00000422436 FAP-004 nonsense_mediated_decay Homo_sapiens 0 1099
ENST00000443424 FAP-015 protein_coding Homo_sapiens 0 2785
ENST00000447386 FAP-007 protein_coding Homo_sapiens 0 224
ENST00000461506 FAP-010 retained_intron Homo_sapiens 0 532
ENST00000462608 FAP-014 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000465088 FAP-011 retained_intron Homo_sapiens 0 531
ENST00000465424 FAP-008 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000480044 FAP-005 retained_intron Homo_sapiens 0 560
ENST00000480838 FAP-003 retained_intron Homo_sapiens 0 861

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