C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174484 Psme1-006 ENSMUSG00000022216 10090 + 14:55578123-55581346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000174484
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000174484 23.979±3.22 27.508±2.03 33.280±9.94 24.343±3.71 13.855±2.16 12.828±2.21 13.932±2.94 29.016±2.30 24.850±4.18 14.463±5.65 1.967±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037E CIL_00037E_0002 CGP 14:55575617-55581529
CIL_00031C CIL_00031C_0002 CGP 14:55578123-55585302

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008537 IEA proteasome activator complex
GO:0010950 IPI positive regulation of endopeptidase activity
GO:0019884 IMP antigen processing and presentation of exogenous antigen
GO:0061133 IPI endopeptidase activator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000206451 PSME1-001 protein_coding Homo_sapiens 0 928
ENST00000382708 PSME1-005 protein_coding Homo_sapiens 0 850
ENST00000470718 PSME1-004 processed_transcript Homo_sapiens 0 403
ENST00000558112 PSME1-012 nonsense_mediated_decay Homo_sapiens 0 582
ENST00000559123 PSME1-006 protein_coding Homo_sapiens 0 878
ENST00000559741 PSME1-011 retained_intron Homo_sapiens 0 326
ENST00000560420 PSME1-008 retained_intron Homo_sapiens 0.0000000000003 81
ENST00000561142 PSME1-010 retained_intron Homo_sapiens 0 590
ENST00000561435 PSME1-009 protein_coding Homo_sapiens 0 891

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