C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sodium channel modifier 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174508 Scnm1-008 ENSMUSG00000092607 10090 - 3:95129719-95130684 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryENSMUST00000174508
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary
ENSMUST00000174508 4.844±0.67 3.082±0.58 5.107±1.07 6.001±2.65 3.922±0.74 5.381±0.81 2.138±0.00 3.725±0.28 2.982±0.00 5.770±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MO CIL_0003MO_0002 CGP 3:95124476-95134011
CIL_0000UG CIL_0000UG_0003 CGP 3:95129536-95139518

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368902 SCNM1-004 protein_coding Homo_sapiens 0 281
ENST00000368905 SCNM1-001 protein_coding Homo_sapiens 0 281
ENST00000459799 SCNM1-005 processed_transcript Homo_sapiens 0 287
ENST00000497147 SCNM1-006 processed_transcript Homo_sapiens 0 281
ENST00000602841 SCNM1-007 protein_coding Homo_sapiens 0 281

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