C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sodium channel modifier 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000368905  |
SCNM1-001 |
ENSG00000163156 |
9606 | + |
1:151166042-151170297  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000UG | CIL_0000UG_0002 | CGP | 1:151156664-151170297 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
| GO:0006397 | IEA | mRNA processing |
| GO:0008380 | IEA | RNA splicing |
| GO:0019899 | IPI | enzyme binding |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000172572
|
Scnm1-001 | protein_coding | Mus_musculus | 0 | 754 |
|
ENSMUST00000173462
|
Scnm1-003 | protein_coding | Mus_musculus | 0 | 449 |
|
ENSMUST00000173527
|
Scnm1-005 | retained_intron | Mus_musculus | 0 | 353 |
|
ENSMUST00000174835
|
Scnm1-007 | processed_transcript | Mus_musculus | 0 | 283 |
|
ENSMUST00000174508
|
Scnm1-008 | retained_intron | Mus_musculus | 0 | 281 |
|
ENSMUST00000174859
|
Scnm1-004 | retained_intron | Mus_musculus | 0 | 254 |
|
ENSMUST00000034431
|
Tmem170-201 | protein_coding | Mus_musculus | 0.0000008 | 60 |
