C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10074
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174543 Gm10074-001 ENSMUSG00000101932 10090 + 17:36226023-36226271 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000174543
Transcript ID Brain Testis
ENSMUST00000174543 1.646±0.00 1.342±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223084 LSM5-002 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000409292 LSM5-005 protein_coding Homo_sapiens 0 313
ENST00000409782 LSM5-009 protein_coding Homo_sapiens 0 309
ENST00000409909 LSM5-007 protein_coding Homo_sapiens 0 311
ENST00000409952 LSM5-008 protein_coding Homo_sapiens 0 311
ENST00000409987 LSM5-010 protein_coding Homo_sapiens 0 235
ENST00000410044 LSM5-004 protein_coding Homo_sapiens 0 311
ENST00000450169 LSM5-001 protein_coding Homo_sapiens 0 320
ENST00000468872 LSM5-006 retained_intron Homo_sapiens 3e-31 139
ENST00000480956 LSM5-003 retained_intron Homo_sapiens 9.94922e-44 182

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