C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sodium channel modifier 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174835 Scnm1-007 ENSMUSG00000092607 10090 - 3:95129726-95131266 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainMuscleOvaryPlacentaTestisENSMUST00000174835
Transcript ID Adrenal Brain Muscle Ovary Placenta Testis
ENSMUST00000174835 3.213±0.00 14.330±0.00 7.796±0.00 16.227±2.28 14.033±0.40 6.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MO CIL_0003MO_0002 CGP 3:95124476-95134011
CIL_0000UG CIL_0000UG_0003 CGP 3:95129536-95139518

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368902 SCNM1-004 protein_coding Homo_sapiens 0 283
ENST00000368905 SCNM1-001 protein_coding Homo_sapiens 0 283
ENST00000459799 SCNM1-005 processed_transcript Homo_sapiens 0 279
ENST00000497147 SCNM1-006 processed_transcript Homo_sapiens 0 283
ENST00000602841 SCNM1-007 protein_coding Homo_sapiens 0 283

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