C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176093 Stx5a-010 ENSMUSG00000010110 10090 + 19:8741512-8744526 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000176093
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000176093 2.288±1.04 0.847±0.03 8.611±0.06 1.486±0.00 0.779±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294179 STX5-001 protein_coding Homo_sapiens 0 327
ENST00000377897 STX5-002 protein_coding Homo_sapiens 0 327
ENST00000394690 STX5-005 protein_coding Homo_sapiens 2e-27 128
ENST00000486437 STX5-006 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000488303 STX5-008 nonsense_mediated_decay Homo_sapiens 2e-28 130
ENST00000491231 STX5-004 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000492066 STX5-003 nonsense_mediated_decay Homo_sapiens 0 329

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