C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 80
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176135 Ift80-007 ENSMUSG00000027778 10090 - 3:68973304-69004388 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000176135
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000176135 15.842±0.00 28.987±0.00 7.273±3.88 105.470±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0003 CGP 3:68892499-69034623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326448 IFT80-001 protein_coding Homo_sapiens 0 549
ENST00000465537 IFT80-022 protein_coding Homo_sapiens 0 468
ENST00000468218 IFT80-015 protein_coding Homo_sapiens 0 241
ENST00000468327 IFT80-021 processed_transcript Homo_sapiens 0 438
ENST00000472773 IFT80-016 processed_transcript Homo_sapiens 0 553
ENST00000475677 IFT80-008 protein_coding Homo_sapiens 0 243
ENST00000477495 IFT80-013 processed_transcript Homo_sapiens 0 549
ENST00000478370 IFT80-014 protein_coding Homo_sapiens 0 326
ENST00000478460 IFT80-017 processed_transcript Homo_sapiens 0 244
ENST00000482317 IFT80-019 nonsense_mediated_decay Homo_sapiens 0 231
ENST00000483465 IFT80-004 protein_coding Homo_sapiens 0 457
ENST00000487943 IFT80-003 retained_intron Homo_sapiens 0 460
ENST00000489004 IFT80-012 protein_coding Homo_sapiens 0 457
ENST00000496589 IFT80-002 protein_coding Homo_sapiens 0 457
ENST00000498409 IFT80-009 protein_coding Homo_sapiens 0 547

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