C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 80
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483465 IFT80-004 ENSG00000068885 9606 - 3:160256992-160383656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartLiverOvaryENST00000483465
Transcript ID Adipose Adrenal Brain Heart Liver Ovary
ENST00000483465 0.806±0.00 2.077±0.00 2.583±0.54 1.035±0.00 1.202±0.38 3.601±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0002 CGP 3:160256986-160434962

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IBA centrosome
GO:0005929 IBA cilium
GO:0030992 IBA intraciliary transport particle B
GO:0042384 IBA cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169064 Ift80-202 protein_coding Mus_musculus 0 2732
ENSMUST00000029347 Ift80-201 protein_coding Mus_musculus 0 2732
ENSMUST00000136448 Ift80-002 retained_intron Mus_musculus 0 2732
ENSMUST00000107812 Ift80-001 protein_coding Mus_musculus 0 2732
ENSMUST00000152502 Ift80-003 retained_intron Mus_musculus 0 1485
ENSMUST00000136176 Ift80-004 retained_intron Mus_musculus 0 1184
ENSMUST00000154741 Ift80-006 protein_coding Mus_musculus 0 732
ENSMUST00000148031 Ift80-005 protein_coding Mus_musculus 0 514
ENSMUST00000176135 Ift80-007 processed_transcript Mus_musculus 0 457
ENSMUST00000176754 Ift80-009 processed_transcript Mus_musculus 0 448

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