C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: intraflagellar transport 80
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487943 IFT80-003 ENSG00000068885 9606 - 3:160258185-160399209 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverLungENST00000487943
Transcript ID Brain Heart Liver Lung
ENST00000487943 2.131±0.00 0.998±0.00 1.890±0.00 5.640±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0002 CGP 3:160256986-160434962

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169064 Ift80-202 protein_coding Mus_musculus 0 2104
ENSMUST00000029347 Ift80-201 protein_coding Mus_musculus 0 2104
ENSMUST00000136448 Ift80-002 retained_intron Mus_musculus 0 2104
ENSMUST00000107812 Ift80-001 protein_coding Mus_musculus 0 2104
ENSMUST00000136176 Ift80-004 retained_intron Mus_musculus 0 1184
ENSMUST00000152502 Ift80-003 retained_intron Mus_musculus 0 857
ENSMUST00000176135 Ift80-007 processed_transcript Mus_musculus 0 460
ENSMUST00000148031 Ift80-005 protein_coding Mus_musculus 0 457
ENSMUST00000154741 Ift80-006 protein_coding Mus_musculus 0 457
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000005 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00007 55

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