C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Pbx/knotted 1 homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176895 Pknox1-002 ENSMUSG00000006705 10090 + 17:31564759-31590076 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000176895
Transcript ID Ovary
ENSMUST00000176895 5.451±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0002 VISTA 17:31053737-31653776
CIL_0000D3 CIL_0000D3_0002 CGP 17:31564749-31637199

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000053210 pknox1.1-001 protein_coding Danio_rerio 9e-16 90
ENSDART00000125032 pknox1.2-001 protein_coding Danio_rerio 0.00000000000001 86
ENST00000291547 PKNOX1-001 protein_coding Homo_sapiens 0 455
ENST00000418336 PKNOX1-006 retained_intron Homo_sapiens 0 473
ENST00000432907 PKNOX1-201 protein_coding Homo_sapiens 0 453

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