C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymine DNA glycosylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177353 Tdg-011 ENSMUSG00000034674 10090 + 10:82641441-82648686 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000002 CIL_000002_0003 CGP 10:82619851-82650799
CIL_0002S6 CIL_0002S6_0002 CGP 10:82629828-82690650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001104 IGI RNA polymerase II transcription cofactor activity
GO:0005080 IPI protein kinase C binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006281 IEA DNA repair
GO:0006366 IGI transcription from RNA polymerase II promoter
GO:0016605 IDA PML body
GO:0016799 IEA hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0032091 IDA negative regulation of protein binding
GO:0032183 IPI SUMO binding
GO:0035562 IDA negative regulation of chromatin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266775 TDG-003 protein_coding Homo_sapiens 0 571
ENST00000392872 TDG-001 protein_coding Homo_sapiens 0 571
ENST00000537100 TDG-008 protein_coding Homo_sapiens 0 468
ENST00000540956 TDG-006 nonsense_mediated_decay Homo_sapiens 5e-36 156
ENST00000542926 TDG-009 retained_intron Homo_sapiens 6e-36 156
ENST00000543961 TDGP1-001 processed_pseudogene Homo_sapiens 0 544
ENST00000544861 TDG-004 protein_coding Homo_sapiens 0 571

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