C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1600029O15 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178259 1600029O15Rik-001 ENSMUSG00000057818 10090 + 9:58208038-58208554 transcribed_processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000178259
Transcript ID Adipose Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000178259 0.275±0.00 0.342±0.12 0.083±0.00 0.032±0.01 0.155±0.08 0.095±0.05 0.041±0.00 0.224±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 359
ENST00000442115 RP11-11M20.2-001 processed_pseudogene Homo_sapiens 7e-32 141
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 398
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 409
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 281

Loading