C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: abl-interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376160 ABI1-004 ENSG00000136754 9606 - 10:26746593-26860973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleOvaryPlacentaTestisENST00000376160
Transcript ID Heart Kidney Muscle Ovary Placenta Testis
ENST00000376160 1.089±0.00 4.508±0.00 0.684±0.00 3.969±1.50 2.268±0.13 1.521±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R4 CIL_0000R4_0001 CGP 10:26438203-26746798
CIL_0000R7 CIL_0000R7_0001 CGP 10:26697659-26861087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140164 Abi1-001 protein_coding Mus_musculus 0 2675
ENSMUST00000126112 Abi1-003 protein_coding Mus_musculus 0 2660
ENSMUST00000091394 Abi1-005 protein_coding Mus_musculus 0 2601
ENSMUST00000123948 Abi1-004 protein_coding Mus_musculus 0 2580
ENSMUST00000178908 Abi1-201 protein_coding Mus_musculus 0 2556
ENSMUST00000149719 Abi1-002 protein_coding Mus_musculus 0 1472
ENSMUST00000078977 Abi1-009 protein_coding Mus_musculus 0 1400
ENSMUST00000093171 Abi1-010 protein_coding Mus_musculus 0 1399
ENSMUST00000139038 Abi1-011 protein_coding Mus_musculus 0 1206
ENSMUST00000114544 Abi1-006 protein_coding Mus_musculus 0 1206
ENSMUST00000153931 Abi1-007 protein_coding Mus_musculus 0 1110
ENSMUST00000154162 Abi1-012 retained_intron Mus_musculus 0 726
ENSMUST00000148294 Abi1-014 retained_intron Mus_musculus 0 710
ENSMUST00000135308 Abi1-015 retained_intron Mus_musculus 0 590
ENSMUST00000156344 Abi1-013 retained_intron Mus_musculus 0 544
ENSMUST00000053729 Pdss1-001 protein_coding Mus_musculus 0 200
ENSMUST00000139472 Pdss1-003 retained_intron Mus_musculus 2.99878e-43 182
ENSMUST00000149229 Pdss1-007 nonsense_mediated_decay Mus_musculus 8e-39 167

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