C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1600029O15 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179787 1600029O15Rik-002 ENSMUSG00000057818 10090 + 9:58202897-58208808 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000179787
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000179787 0.093±0.05 0.031±0.01 2.017±1.24 0.147±0.06 0.062±0.02 0.028±0.02 0.039±0.02 0.007±0.00 0.025±0.00 0.026±0.00 0.087±0.04 0.102±0.08 0.067±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 359
ENST00000442115 RP11-11M20.2-001 processed_pseudogene Homo_sapiens 7e-32 141
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 398
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 409
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 281

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