C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179800 Sh3gl3-009 ENSMUSG00000030638 10090 + 7:82174842-82270038 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000179800
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000179800 0.489±0.07 0.116±0.07 0.071±0.03 0.113±0.08 0.047±0.01 0.018±0.00 0.057±0.03 0.022±0.00 0.241±0.17 0.097±0.00 5.639±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KR CIL_0006KR_0002 CGP 7:81966672-82307419
CIL_0007U9 CIL_0007U9_0002 VISTA 7:82082717-82683985
CIL_000406 CIL_000406_0002 CGP 7:82173840-82614450

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000427482 SH3GL3-002 protein_coding Homo_sapiens 0 272
ENST00000492099 SH3GL3-003 retained_intron Homo_sapiens 0 279
ENST00000563901 SH3GL3-005 nonsense_mediated_decay Homo_sapiens 0 272

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