C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH3-domain GRB2-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492099 SH3GL3-003 ENSG00000140600 9606 + 15:83447228-83565883 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000492099
Transcript ID Heart
ENST00000492099 0.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KR CIL_0006KR_0001 CGP 15:83255903-83618743
CIL_0007U9 CIL_0007U9_0001 VISTA 15:83407808-84009696
CIL_000406 CIL_000406_0001 CGP 15:83447228-84039842

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179800 Sh3gl3-009 retained_intron Mus_musculus 0 279
ENSMUST00000177883 Sh3gl3-005 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000032874 Sh3gl3-001 protein_coding Mus_musculus 0 272
ENSMUST00000177895 Sh3gl3-006 nonsense_mediated_decay Mus_musculus 0 231
ENSMUST00000107184 Sh3gl2-004 protein_coding Mus_musculus 0.00000000002 75
ENSMUST00000107189 Sh3gl2-003 protein_coding Mus_musculus 0.00000000002 75
ENSMUST00000107188 Sh3gl2-002 protein_coding Mus_musculus 0.00000000002 75
ENSMUST00000030212 Sh3gl2-001 protein_coding Mus_musculus 0.00000000002 75

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