C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8941
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181451 Gm8941-001 ENSMUSG00000097426 10090 + 1:151136507-151137780 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000181451
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000181451 0.032±0.00 0.377±0.06 0.160±0.00 0.042±0.02 0.443±0.12 8.638±1.49 0.137±0.06 0.212±0.12 0.047±0.00 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065A CIL_00065A_0002 CGP 1:150562524-151364422

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 1.96182e-44 183
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 741
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 651
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 741
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 741
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 741
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 313
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 431
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 350
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 470
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 684
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 451
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 651
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 651
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 505
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 549
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 529
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 350
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 497
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 481
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 481
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 342
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 741

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