C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182115 Gapdh-016 ENSMUSG00000057666 10090 - 6:125162871-125165590 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000182115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182115 975.035±130.10 1101.046±189.90 417.637±38.51 339.700±89.24 1013.665±269.01 1156.218±66.06 1423.758±452.57 1783.733±338.48 851.819±224.41 387.501±29.95 601.651±238.66 930.726±109.00 100.996±14.73

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 307
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 287
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 281
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 307
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 307
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 217
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 189
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 217
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 211
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 268
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 222
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 259
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 7.9874e-44 182
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 4e-37 159
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 5.60519e-45 185
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 287
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 287
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 287
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 281
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 233
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 246
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 7.9874e-44 182
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 1e-32 145
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 219
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 244
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 237
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 2e-25 121

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