C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525153 GEMIN2-004 ENSG00000092208 9606 + 14:39114285-39136973 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleTestisENST00000525153
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Testis
ENST00000525153 0.444±0.00 0.830±0.00 0.636±0.00 0.573±0.00 0.149±0.00 0.184±0.00 0.730±0.00 0.621±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VW CIL_0003VW_0001 CGP 14:39031919-39136973
CIL_0003VX CIL_0003VX_0001 CGP 14:39114223-39170532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000387 IEA spliceosomal snRNP assembly
GO:0005681 IEA spliceosomal complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182188 Gemin2-002 retained_intron Mus_musculus 0 612
ENSMUST00000021379 Gemin2-001 protein_coding Mus_musculus 0 612
ENSMUST00000190772 RP24-145A22.1-001 processed_pseudogene Mus_musculus 0 414

Loading