C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8254
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182326 Gm8254-001 ENSMUSG00000098046 10090 - 8:34321853-34322824 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryTestisENSMUST00000182326
Transcript ID Brain Colon Ovary Testis
ENSMUST00000182326 0.016±0.01 0.152±0.00 0.098±0.00 0.097±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D0 CIL_0008D0_0002 VISTA 8:33748285-34351942

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 2e-39 167
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 473
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 472
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 472
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 473
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 473
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 375
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 235
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 351
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 442
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 418
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 412
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 307
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 357
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 472
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 472
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 472
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 459
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 339
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 372
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 398
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 303
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 200
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 414
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 392
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 342
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 255
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 255
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 472

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