C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | coiled-coil domain containing 53 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000182619  |
Ccdc53-008 |
ENSMUSG00000020056 |
10090 | + |
10:88201263-88225141  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00079C | CIL_00079C_0002 | CGP | 10:88201093-88379080 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0008150 | ND | biological_process |
| GO:0071203 | IEA | WASH complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000240079
|
CCDC53-001 | protein_coding | Homo_sapiens | 0 | 507 |
|
ENST00000326351
|
CCDC53-008 | retained_intron | Homo_sapiens | 0 | 411 |
|
ENST00000500685
|
CCDC53-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 296 |
|
ENST00000518956
|
KB-1517D11.2-001 | processed_pseudogene | Homo_sapiens | 0 | 374 |
|
ENST00000535501
|
CCDC53-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 320 |
|
ENST00000536930
|
CCDC53-011 | processed_transcript | Homo_sapiens | 0 | 195 |
|
ENST00000538761
|
CCDC53-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 315 |
|
ENST00000539515
|
CCDC53-005 | processed_transcript | Homo_sapiens | 0 | 320 |
|
ENST00000540536
|
CCDC53-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 507 |
|
ENST00000541569
|
CCDC53-009 | retained_intron | Homo_sapiens | 0 | 507 |
|
ENST00000542923
|
CCDC53-012 | protein_coding | Homo_sapiens | 0 | 217 |
|
ENST00000544341
|
CCDC53-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 510 |
|
ENST00000545679
|
CCDC53-002 | protein_coding | Homo_sapiens | 0 | 510 |
