C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 53
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541569 CCDC53-009 ENSG00000120860 9606 - 12:102025921-102061978 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMusclePlacentaENST00000541569
Transcript ID Kidney Muscle Placenta
ENST00000541569 3.603±0.00 5.136±0.00 6.421±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020248 Ccdc53-001 protein_coding Mus_musculus 0 636
ENSMUST00000182183 Ccdc53-007 protein_coding Mus_musculus 0 628
ENSMUST00000171151 Ccdc53-002 protein_coding Mus_musculus 0 569
ENSMUST00000182619 Ccdc53-008 protein_coding Mus_musculus 0 507
ENSMUST00000182359 Ccdc53-005 processed_transcript Mus_musculus 0 296
ENSMUST00000182299 Ccdc53-004 nonsense_mediated_decay Mus_musculus 0 248
ENSMUST00000182351 Ccdc53-003 retained_intron Mus_musculus 0 237

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