C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 53
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538761 CCDC53-010 ENSG00000120860 9606 - 12:102012927-102061974 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000538761
Transcript ID Ovary
ENST00000538761 7.223±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0071203 IEA WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020248 Ccdc53-001 protein_coding Mus_musculus 0 464
ENSMUST00000182183 Ccdc53-007 protein_coding Mus_musculus 0 455
ENSMUST00000171151 Ccdc53-002 protein_coding Mus_musculus 0 324
ENSMUST00000182619 Ccdc53-008 protein_coding Mus_musculus 0 315
ENSMUST00000182359 Ccdc53-005 processed_transcript Mus_musculus 0 300
ENSMUST00000182299 Ccdc53-004 nonsense_mediated_decay Mus_musculus 0 252
ENSMUST00000182351 Ccdc53-003 retained_intron Mus_musculus 3e-32 143

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