C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7583
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182941 Gm7583-001 ENSMUSG00000097981 10090 - 7:67782777-67783781 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000182941
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182941 0.169±0.00 0.304±0.18 0.214±0.02 0.123±0.00 0.162±0.05 0.031±0.00 0.057±0.02 0.017±0.00 0.057±0.02 0.094±0.04 0.058±0.02 0.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TF CIL_0008TF_0002 VISTA 7:67710091-68313211

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 935
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 750
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 928
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 935
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 935
ENST00000399414 RP1-31B8.1-001 processed_pseudogene Homo_sapiens 5e-30 135
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 689
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 857
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 739
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 462
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 544
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 597
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 516
ENST00000443168 GAPDHP33-001 processed_pseudogene Homo_sapiens 0 366
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 484
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 702
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 854
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 196
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 750
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 750
ENST00000480688 GAPDHP36-001 processed_pseudogene Homo_sapiens 0 379
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 691
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 684
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 691
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 270
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 741
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 697
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 719
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 388
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 845

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