C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008TF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1932 VISTA 9606 15:98414511-99018999
GeneTranscriptPositionBiotype
ENSG00000140443 (IGF1R)
insulin-like growth factor 1 receptor 		ENST00000268035 (IGF1R-001) 98648971-98964530 protein_coding
ENST00000557873 (IGF1R-012) 98873719-98896889 processed_transcript
ENST00000557938 (IGF1R-014) 98734712-98899546 processed_transcript
ENST00000558355 (IGF1R-017) 98707831-98891619 protein_coding
ENST00000558751 (IGF1R-005) 98952795-98957292 processed_transcript
ENST00000558762 (IGF1R-002) 98649044-98964529 protein_coding
ENST00000558898 (IGF1R-011) 98890341-98911398 protein_coding
ENST00000558947 (IGF1R-009) 98897286-98899576 processed_transcript
ENST00000559582 (IGF1R-008) 98900610-98913114 processed_transcript
ENST00000559925 (IGF1R-003) 98649582-98916955 retained_intron
ENST00000560144 (IGF1R-016) 98913176-98922242 nonsense_mediated_decay
ENST00000560186 (IGF1R-015) 98820866-98896919 processed_transcript
ENST00000560277 (IGF1R-013) 98820884-98896849 processed_transcript
ENST00000560343 (IGF1R-006) 98923782-98924636 retained_intron
ENST00000560432 (IGF1R-010) 98890542-98896886 processed_transcript
ENST00000560972 (IGF1R-004) 98924600-98935366 protein_coding
ENST00000561049 (IGF1R-007) 98916485-98923881 retained_intron
ENSG00000183571 (PGPEP1L)
pyroglutamyl-peptidase I-like 		ENST00000378919 (PGPEP1L-001) 98968280-99005562 protein_coding
ENST00000535714 (PGPEP1L-002) 98968230-99007795 protein_coding
ENSG00000185087 (FAM169B)
family with sequence similarity 169, member B 		ENST00000332908 (FAM169B-201) 98439631-98480780 protein_coding
ENST00000558256 (FAM169B-001) 98437162-98514382 protein_coding
ENSG00000259424 (RP11-35O15.1)
 ENST00000560221 (RP11-35O15.1-001) 98646951-98647371 antisense
ENSG00000259621 (RP11-654A16.1)
 ENST00000558736 (RP11-654A16.1-001) 98880659-98893535 antisense
ENSG00000264480 (MIR4714)
microRNA 4714 		ENST00000580728 (MIR4714-201) 98784426-98784502 miRNA
ENSG00000278022 (RP11-35O15.2)
 ENST00000618697 (RP11-35O15.2-001) 98660210-98660668 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0008TF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1932 VISTA 10090 7:67710091-68313211
GeneTranscriptPositionBiotype
ENSMUSG00000005533 (Igf1r)
insulin-like growth factor I receptor 		ENSMUST00000005671 (Igf1r-201) 67952859-68226780 protein_coding
ENSMUSG00000030553 (Pgpep1l)
pyroglutamyl-peptidase I-like 		ENSMUST00000032770 (Pgpep1l-201) 68236608-68264233 protein_coding
ENSMUSG00000030554 (Synm)
synemin, intermediate filament protein 		ENSMUST00000051389 (Synm-201) 67730161-67759742 protein_coding
ENSMUST00000074233 (Synm-202) 67730161-67759742 protein_coding
ENSMUSG00000074071 (Fam169b)
family with sequence similarity 169, member B 		ENSMUST00000098378 (Fam169b-201) 68300113-68363087 lincRNA
ENSMUST00000125685 (Fam169b-001) 68273839-68363089 lincRNA
ENSMUST00000153458 (Fam169b-003) 68331124-68353725 lincRNA
ENSMUST00000153805 (Fam169b-002) 68275995-68353646 lincRNA
ENSMUSG00000080609 (Gm23844)
predicted gene, 23844 		ENSMUST00000116959 (Gm23844-201) 67778410-67778530 miRNA
ENSMUSG00000086628 (Gm16157)
predicted gene 16157 		ENSMUST00000124813 (Gm16157-002) 68266952-68276594 lincRNA
ENSMUST00000135564 (Gm16157-001) 68266339-68275098 lincRNA
ENSMUSG00000097697 (4833412C05Rik)
RIKEN cDNA 4833412C05 gene 		ENSMUST00000181235 (4833412C05Rik-201) 67784725-67803496 lincRNA
ENSMUSG00000097981 (Gm7583)
predicted gene 7583 		ENSMUST00000182941 (Gm7583-001) 67782777-67783781 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008TF_0001ENSG00000140443ENST00000268035ENST00000558762ENST00000558898ENST00000559925ENST00000560144ENSG00000183571ENST00000378919ENST00000535714ENSG00000185087ENST00000332908ENST00000558256ENSG00000259424ENST00000560221ENSG00000259621ENST00000558736ENSG00000264480ENST00000580728ENSG00000278022ENST00000618697CIL_0008TF_0002ENSMUSG00000005533ENSMUST00000005671ENSMUSG00000030553ENSMUST00000032770ENSMUSG00000030554ENSMUST00000051389ENSMUST00000074233ENSMUSG00000074071ENSMUST00000098378ENSMUST00000125685ENSMUST00000153458ENSMUSG00000080609ENSMUST00000116959ENSMUSG00000086628ENSMUST00000124813ENSMUST00000135564ENSMUSG00000097697ENSMUST00000181235ENSMUSG00000097981ENSMUST00000182941
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140443 ENST00000268035 3.709±0.00 N/A 4.980±0.00 2.196±0.00 1.820±0.00 1.680±0.00 1.739±0.00 2.908±0.00 N/A 2.430±0.72 2.136±0.00 3.845±0.00 0.964±0.08 2.291±0.00
ENST00000557873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558762 N/A 1.657±0.00 N/A 1.940±0.00 0.793±0.00 1.695±0.00 0.677±0.19 N/A 1.519±1.30 N/A 1.338±0.00 1.398±0.11 1.663±1.35 2.544±0.00
ENST00000558898 N/A N/A N/A N/A N/A N/A N/A 1.406±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559925 N/A N/A N/A N/A 3.978±0.00 N/A 0.797±0.00 N/A 3.552±0.00 N/A N/A N/A N/A N/A
ENST00000560144 N/A N/A N/A N/A N/A N/A N/A 2.317±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183571 ENST00000378919 0.099±0.00 0.100±0.00 0.132±0.00 0.043±0.00 0.244±0.00 N/A 0.240±0.10 N/A 0.072±0.00 0.082±0.00 2.773±1.03 N/A 0.057±0.02 0.454±0.00
ENST00000535714 N/A 0.089±0.00 N/A 0.049±0.00 N/A N/A 0.253±0.00 0.179±0.00 N/A N/A 0.748±0.45 N/A N/A 1.063±0.98
ENSG00000185087 ENST00000332908 N/A N/A 0.639±0.00 0.038±0.00 0.244±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558256 0.033±0.00 0.058±0.00 N/A 0.036±0.00 0.020±0.00 0.014±0.00 0.024±0.01 0.146±0.00 0.413±0.00 0.004±0.00 N/A 0.020±0.00 N/A 0.216±0.09
ENSG00000259424 ENST00000560221 N/A N/A N/A 0.074±0.00 0.273±0.00 0.124±0.00 0.126±0.00 0.687±0.00 N/A N/A N/A 0.228±0.09 0.221±0.02 0.424±0.00
ENSG00000259621 ENST00000558736 N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A 0.485±0.00 N/A N/A N/A
ENSG00000264480 ENST00000580728 N/A N/A N/A N/A N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000278022 ENST00000618697 0.032±0.00 0.287±0.00 2.088±0.00 0.035±0.00 0.807±0.00 0.147±0.00 0.189±0.13 N/A 0.826±0.00 0.156±0.06 N/A 0.443±0.27 0.148±0.00 0.445±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005533 ENSMUST00000005671 1.255±0.41 12.224±2.51 N/A N/A 2.107±0.98 2.335±0.51 2.026±0.38 9.792±3.53 0.284±0.36 6.170±2.86 1.022±0.31 12.830±3.94 6.154±3.34 1.299±0.54
ENSMUSG00000030553 ENSMUST00000032770 0.081±0.00 0.185±0.00 0.760±0.28 0.080±0.00 0.229±0.14 0.079±0.00 0.108±0.05 0.308±0.22 0.132±0.14 0.295±0.11 1.177±0.43 0.324±0.20 0.352±0.33 0.182±0.07
ENSMUSG00000030554 ENSMUST00000051389 2.863±1.59 1.075±0.31 105.335±13.22 3.547±2.67 5.763±4.98 15.536±4.01 0.995±0.08 0.426±0.08 0.050±0.03 5.764±0.74 91.034±39.47 5.329±2.95 0.560±0.84 1.551±0.43
ENSMUST00000074233 1.587±0.61 1.029±0.15 36.855±8.61 0.854±0.58 1.069±0.47 8.508±0.97 0.429±0.12 0.272±0.07 0.085±0.06 3.210±0.26 N/A 2.568±1.32 0.348±0.49 0.891±0.37
ENSMUSG00000074071 ENSMUST00000098378 N/A 0.057±0.00 N/A 0.033±0.01 4.855±1.59 0.513±0.00 0.099±0.00 1.216±0.27 4.589±3.61 0.629±0.02 0.156±0.09 0.787±0.48 0.227±0.11 0.290±0.18
ENSMUST00000125685 N/A 0.095±0.02 N/A N/A 3.445±0.93 0.326±0.12 0.056±0.00 0.396±0.00 1.760±0.02 N/A N/A 0.347±0.00 N/A 0.507±0.00
ENSMUST00000153458 N/A N/A N/A N/A N/A 0.401±0.00 N/A N/A N/A N/A N/A 1.346±0.07 N/A N/A
ENSMUST00000153805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080609 ENSMUST00000116959 N/A N/A N/A 6.233±0.00 N/A N/A N/A N/A 1.683±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000086628 ENSMUST00000124813 N/A N/A N/A N/A 0.221±0.00 N/A N/A 0.557±0.24 0.687±0.90 N/A N/A 0.096±0.00 0.384±0.00 0.080±0.00
ENSMUST00000135564 N/A N/A 0.008±0.00 0.008±0.00 0.145±0.05 N/A N/A 0.109±0.06 1.682±1.49 0.054±0.00 N/A 0.023±0.00 0.058±0.04 0.039±0.00
ENSMUSG00000097697 ENSMUST00000181235 0.368±0.25 0.095±0.00 3.751±0.18 0.044±0.01 0.220±0.19 2.860±0.79 0.195±0.07 0.080±0.04 0.073±0.05 0.496±0.11 0.047±0.02 0.719±0.43 0.371±0.46 0.087±0.04
ENSMUSG00000097981 ENSMUST00000182941 0.169±0.00 0.304±0.18 0.214±0.02 0.123±0.00 N/A 0.162±0.05 0.031±0.00 0.057±0.02 0.017±0.00 0.057±0.02 N/A 0.094±0.04 0.058±0.02 0.067±0.00

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