C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8955
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182945 Gm8955-001 ENSMUSG00000098036 10090 - 3:14428492-14435009 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyENSMUST00000182945
Transcript ID Adipose Breast Heart Kidney
ENSMUST00000182945 0.035±0.00 0.033±0.00 0.030±0.00 0.070±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 828
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 595
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 817
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 828
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 828
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 649
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 568
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 204
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 470
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 525
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 728
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 636
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 440
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 388
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 285
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 479
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 785
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 377
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 595
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 595
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 603
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 599
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 675
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 479
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 237
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 612
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 715

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