C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530548 PPFIA1-006 ENSG00000131626 9606 + 11:70364342-70384394 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000530548
Transcript ID Muscle
ENST00000530548 1.187±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182226 Ppfia1-002 protein_coding Mus_musculus 0 998
ENSMUST00000168134 Ppfia1-003 protein_coding Mus_musculus 0 998
ENSMUST00000182958 Ppfia1-004 nonsense_mediated_decay Mus_musculus 0 929
ENSMUST00000182982 Ppfia1-005 retained_intron Mus_musculus 0 806
ENSMUST00000183063 Ppfia1-010 processed_transcript Mus_musculus 0 401
ENSDART00000112567 ppfia4-001 protein_coding Danio_rerio 0 213

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