C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 8 (sodium/calcium exchanger), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183102 Slc8a3-003 ENSMUSG00000079055 10090 - 12:81214024-81333180 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyOvaryPlacentaTestisENSMUST00000183102
Transcript ID Adipose Kidney Ovary Placenta Testis
ENSMUST00000183102 0.044±0.00 0.023±0.00 0.099±0.00 0.036±0.01 0.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M6 CIL_0002M6_0002 CGP 12:81026808-81333180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216568 SLC8A3-006 protein_coding Homo_sapiens 5.60519e-45 187
ENST00000356921 SLC8A3-001 protein_coding Homo_sapiens 0 2889
ENST00000357887 SLC8A3-201 protein_coding Homo_sapiens 0 2708
ENST00000381269 SLC8A3-003 protein_coding Homo_sapiens 0 2883
ENST00000494208 SLC8A3-002 nonsense_mediated_decay Homo_sapiens 0 2702
ENST00000528359 SLC8A3-005 protein_coding Homo_sapiens 0 2510
ENST00000533899 SLC8A3-009 processed_transcript Homo_sapiens 2.8026e-45 185
ENST00000534137 SLC8A3-004 protein_coding Homo_sapiens 0 2686

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