C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 8 (sodium/calcium exchanger), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381269 SLC8A3-003 ENSG00000100678 9606 - 14:70044217-70189070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryTestisENST00000381269
Transcript ID Muscle Ovary Testis
ENST00000381269 1.436±0.00 0.013±0.00 0.071±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M6 CIL_0002M6_0001 CGP 14:69854131-70189070
CIL_0006J1 CIL_0006J1_0002 CGP 14:70044217-70359731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005432 IEA calcium:sodium antiporter activity
GO:0005516 IEA calmodulin binding
GO:0005739 IEA mitochondrion
GO:0005874 IEA microtubule
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006816 IEA calcium ion transport
GO:0007154 IEA cell communication
GO:0007596 TAS blood coagulation
GO:0015368 IEA calcium:cation antiporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0021537 IEA telencephalon development
GO:0030001 IEA metal ion transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0042383 IEA sarcolemma
GO:0042995 IEA cell projection
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0055085 TAS:IEA transmembrane transport
GO:0060402 IEA calcium ion transport into cytosol
GO:0070588 IEA calcium ion transmembrane transport
GO:0071320 IEA cellular response to cAMP
GO:1990034 IEA calcium ion export from cell
GO:1990035 IEA calcium ion import into cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064594 Slc8a3-004 protein_coding Mus_musculus 0 4244
ENSMUST00000085238 Slc8a3-001 protein_coding Mus_musculus 0 4133
ENSMUST00000182208 Slc8a3-002 protein_coding Mus_musculus 0 3880
ENSMUST00000183102 Slc8a3-003 retained_intron Mus_musculus 0 2883
ENSMUST00000182366 Slc8a3-005 protein_coding Mus_musculus 0 623
ENSDART00000000804 slc8a1b-201 protein_coding Danio_rerio 0 455
ENSDART00000089919 slc8a1b-202 protein_coding Danio_rerio 0 455
ENSDART00000128875 slc8a1b-002 protein_coding Danio_rerio 0 455
ENSDART00000151929 slc8a1b-001 protein_coding Danio_rerio 0 455
ENSDART00000046800 slc8a1a-201 protein_coding Danio_rerio 0 387
ENSDART00000089803 slc8a1a-001 protein_coding Danio_rerio 0 387

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