C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002M6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198732-ENSG00000100678 CGP 9606 14:69854131-70189070
GeneTranscriptPositionBiotype
ENSG00000100678 (SLC8A3)
solute carrier family 8 (sodium/calcium exchanger), member 3 		ENST00000216568 (SLC8A3-006) 70044255-70080206 protein_coding
ENST00000356921 (SLC8A3-001) 70044217-70189070 protein_coding
ENST00000357887 (SLC8A3-201) 70044220-70189070 protein_coding
ENST00000381269 (SLC8A3-003) 70044217-70189070 protein_coding
ENST00000394330 (SLC8A3-007) 70044419-70080180 protein_coding
ENST00000494208 (SLC8A3-002) 70044217-70189070 nonsense_mediated_decay
ENST00000528359 (SLC8A3-005) 70045947-70168484 protein_coding
ENST00000533541 (SLC8A3-008) 70046075-70080180 protein_coding
ENST00000533899 (SLC8A3-009) 70059106-70060939 processed_transcript
ENST00000534137 (SLC8A3-004) 70045947-70168484 protein_coding
ENSG00000198732 (SMOC1)
SPARC related modular calcium binding 1 		ENST00000361956 (SMOC1-001) 69879416-70030727 protein_coding
ENST00000381280 (SMOC1-002) 69879426-70032366 protein_coding
ENST00000553839 (SMOC1-003) 69952137-69978088 retained_intron
ENST00000555917 (SMOC1-005) 69854131-69952303 processed_transcript
ENST00000557483 (SMOC1-004) 69994239-70011568 retained_intron
ENSG00000242071 (RPL7AP6)
ribosomal protein L7a pseudogene 6 		ENST00000477943 (RPL7AP6-001) 69885340-69886140 processed_pseudogene
ENSG00000258422 (RP11-486O13.2)
 ENST00000554008 (RP11-486O13.2-002) 70223765-70230108 antisense
ENST00000555198 (RP11-486O13.2-001) 70223776-70230181 antisense
ENST00000555480 (RP11-486O13.2-003) 70187123-70230187 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0002M6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021136-ENSMUSG00000079055 CGP 10090 12:81026808-81333180
GeneTranscriptPositionBiotype
ENSMUSG00000021136 (Smoc1)
SPARC related modular calcium binding 1 		ENSMUST00000021564 (Smoc1-002) 81026828-81186410 protein_coding
ENSMUST00000110347 (Smoc1-001) 81026808-81186414 protein_coding
ENSMUST00000129362 (Smoc1-003) 81026828-81186410 protein_coding
ENSMUSG00000079055 (Slc8a3)
solute carrier family 8 (sodium/calcium exchanger), member 3 		ENSMUST00000064594 (Slc8a3-004) 81198276-81332959 protein_coding
ENSMUST00000085238 (Slc8a3-001) 81197915-81333164 protein_coding
ENSMUST00000182208 (Slc8a3-002) 81199446-81333180 protein_coding
ENSMUST00000182366 (Slc8a3-005) 81202397-81294674 protein_coding
ENSMUST00000183102 (Slc8a3-003) 81214024-81333180 retained_intron
ENSMUSG00000098128 (Gm3693)
predicted gene 3693 		ENSMUST00000182077 (Gm3693-001) 81228284-81243258 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M6_0001ENSG00000100678ENST00000216568ENST00000356921ENST00000357887ENST00000381269ENST00000394330ENST00000494208ENST00000528359ENST00000533541ENST00000533899ENST00000534137ENSG00000198732ENST00000361956ENST00000381280ENST00000553839ENST00000555917ENST00000557483ENSG00000242071ENST00000477943ENSG00000258422ENST00000554008ENST00000555198ENST00000555480CIL_0002M6_0002ENSMUSG00000021136ENSMUST00000021564ENSMUST00000110347ENSMUST00000129362ENSMUSG00000079055ENSMUST00000064594ENSMUST00000085238ENSMUST00000182208ENSMUST00000182366ENSMUST00000183102ENSMUSG00000098128ENSMUST00000182077
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M6_0001ENSG00000100678ENST00000216568ENST00000356921ENST00000381269ENST00000394330ENST00000494208ENST00000533541ENST00000534137ENSG00000198732ENST00000361956ENST00000381280ENST00000557483ENSG00000242071ENST00000477943ENSG00000258422ENST00000554008ENST00000555480CIL_0002M6_0002ENSMUSG00000021136ENSMUST00000021564ENSMUST00000110347ENSMUST00000129362ENSMUSG00000079055ENSMUST00000064594ENSMUST00000085238ENSMUST00000182208ENSMUST00000182366ENSMUST00000183102ENSMUSG00000098128ENSMUST00000182077
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100678 ENST00000216568 N/A 0.118±0.00 N/A 0.941±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A
ENST00000356921 N/A N/A N/A 1.677±0.78 0.092±0.00 N/A N/A N/A 0.419±0.00 N/A 1.105±0.00 N/A N/A 0.110±0.00
ENST00000357887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.436±0.00 0.013±0.00 N/A 0.071±0.03
ENST00000394330 N/A N/A N/A 0.651±0.00 N/A N/A 0.047±0.00 N/A 0.010±0.00 0.184±0.07 N/A 0.027±0.00 N/A N/A
ENST00000494208 0.077±0.00 N/A N/A 0.798±0.00 N/A 0.025±0.01 0.020±0.00 0.006±0.00 N/A 0.253±0.00 1.695±1.13 0.013±0.00 0.022±0.01 N/A
ENST00000528359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533541 N/A N/A N/A N/A 0.060±0.00 N/A 0.022±0.00 N/A 0.010±0.00 N/A N/A N/A 0.019±0.01 0.017±0.00
ENST00000533899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534137 N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.154±0.00 N/A 0.016±0.00 N/A 0.123±0.00
ENSG00000198732 ENST00000361956 1.823±0.00 0.826±0.00 N/A 0.936±0.00 N/A 0.112±0.00 0.455±0.00 2.513±0.00 9.549±0.00 0.302±0.00 1.790±0.00 3.941±4.47 6.903±1.71 9.790±0.00
ENST00000381280 1.175±0.00 N/A 0.222±0.00 12.011±10.94 0.587±0.49 0.080±0.00 0.122±0.07 3.274±2.92 25.846±0.00 N/A 0.028±0.00 5.144±4.55 2.737±0.70 12.072±0.66
ENST00000553839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557483 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.386±0.00 N/A 27.008±0.00 N/A N/A
ENSG00000242071 ENST00000477943 0.216±0.00 0.312±0.00 N/A 0.146±0.12 0.204±0.10 0.243±0.09 N/A 0.191±0.00 N/A 0.108±0.00 0.327±0.12 0.896±0.80 0.137±0.06 0.068±0.00
ENSG00000258422 ENST00000554008 0.415±0.00 0.697±0.00 N/A 0.515±0.00 0.820±0.00 0.124±0.00 0.347±0.00 0.449±0.00 0.178±0.14 0.301±0.00 N/A 0.067±0.00 0.072±0.00 N/A
ENST00000555198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555480 N/A N/A 0.782±0.00 0.368±0.00 N/A N/A N/A N/A N/A N/A 0.396±0.00 0.034±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021136 ENSMUST00000021564 45.850±20.65 N/A 3.794±0.17 9.095±3.26 17.230±5.88 0.766±0.00 2.395±0.57 0.740±0.11 10.222±4.18 1.503±0.51 0.360±0.17 17.174±12.53 11.540±6.71 1.497±0.54
ENSMUST00000110347 6.378±1.59 88.171±57.18 0.654±0.10 3.038±0.24 20.214±5.67 0.976±0.36 0.564±0.13 0.455±0.22 6.479±4.82 1.161±0.71 0.236±0.10 19.414±9.51 4.882±3.17 N/A
ENSMUST00000129362 N/A N/A N/A N/A 11.400±4.37 0.389±0.19 0.769±0.41 0.734±0.25 6.932±0.00 0.970±0.16 0.210±0.00 13.803±4.50 N/A 1.018±0.00
ENSMUSG00000079055 ENSMUST00000064594 0.051±0.03 0.083±0.00 0.137±0.00 3.699±0.00 0.494±0.39 0.304±0.11 N/A 0.054±0.01 0.011±0.00 0.225±0.20 3.744±0.85 0.151±0.05 0.029±0.01 0.019±0.01
ENSMUST00000085238 0.036±0.00 N/A 0.069±0.04 2.274±0.89 0.260±0.00 N/A 0.050±0.00 0.043±0.00 0.038±0.02 0.278±0.00 5.215±0.00 0.106±0.02 0.046±0.00 0.025±0.01
ENSMUST00000182208 0.036±0.01 0.160±0.04 N/A N/A 0.716±0.48 0.273±0.09 0.058±0.05 0.045±0.02 0.020±0.01 0.285±0.12 N/A 0.233±0.12 0.015±0.00 0.008±0.00
ENSMUST00000182366 N/A N/A N/A 22.465±0.00 N/A N/A 0.142±0.00 N/A 0.089±0.05 N/A N/A 0.295±0.00 0.172±0.08 0.261±0.00
ENSMUST00000183102 0.044±0.00 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A 0.099±0.00 0.036±0.01 0.050±0.00
ENSMUSG00000098128 ENSMUST00000182077 0.027±0.00 N/A 0.005±0.00 0.181±0.03 N/A 0.037±0.01 N/A N/A 0.006±0.00 0.031±0.00 0.029±0.01 0.008±0.00 0.007±0.00 N/A

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