Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	solute carrier family 8 (sodium/calcium exchanger), member 3
ENST00000528359	SLC8A3-005	ENSG00000100678	9606	-	14:70045947-70168484	protein_coding

Expression Patterns

No expression data.

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0002M6	CIL_0002M6_0001	CGP	14:69854131-70189070
CIL_0006J1	CIL_0006J1_0002	CGP	14:70044217-70359731

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005432	IEA	calcium:sodium antiporter activity
GO:0005516	IEA	calmodulin binding
GO:0005886	TAS	plasma membrane
GO:0006811	TAS	ion transport
GO:0006816	IEA	calcium ion transport
GO:0007154	IEA	cell communication
GO:0007596	TAS	blood coagulation
GO:0016020	IEA	membrane
GO:0016021	IEA	integral component of membrane
GO:0035725	IEA	sodium ion transmembrane transport
GO:0055085	TAS:IEA	transmembrane transport

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000182208	Slc8a3-002	protein_coding	Mus_musculus	0	3853
ENSMUST00000064594	Slc8a3-004	protein_coding	Mus_musculus	0	3627
ENSMUST00000085238	Slc8a3-001	protein_coding	Mus_musculus	0	3605
ENSMUST00000183102	Slc8a3-003	retained_intron	Mus_musculus	0	2510
ENSMUST00000182366	Slc8a3-005	protein_coding	Mus_musculus	0	514
ENSDART00000000804	slc8a1b-201	protein_coding	Danio_rerio	0	455
ENSDART00000089919	slc8a1b-202	protein_coding	Danio_rerio	0	455
ENSDART00000128875	slc8a1b-002	protein_coding	Danio_rerio	0	455
ENSDART00000151929	slc8a1b-001	protein_coding	Danio_rerio	0	455
ENSDART00000046800	slc8a1a-201	protein_coding	Danio_rerio	0	387
ENSDART00000089803	slc8a1a-001	protein_coding	Danio_rerio	0	387

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